CDS

Accession Number TCMCG057C36469
gbkey CDS
Protein Id XP_018440150.1
Location join(45730792..45730912,45731006..45731096,45731171..45731501,45731600..45731674,45731752..45731796,45731962..45732055,45732147..45732205,45732309..45732434,45732617..45732669,45732905..45732938,45733148..45733237,45733326..45735419,45735527..45736459)
Gene LOC108812396
GeneID 108812396
Organism Raphanus sativus

Protein

Length 1381aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018584648.1
Definition PREDICTED: DExH-box ATP-dependent RNA helicase DExH6-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14442        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0007281        [VIEW IN EMBL-EBI]
GO:0007283        [VIEW IN EMBL-EBI]
GO:0007286        [VIEW IN EMBL-EBI]
GO:0007292        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009994        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034458        [VIEW IN EMBL-EBI]
GO:0034612        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0043902        [VIEW IN EMBL-EBI]
GO:0043903        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044788        [VIEW IN EMBL-EBI]
GO:0044794        [VIEW IN EMBL-EBI]
GO:0044827        [VIEW IN EMBL-EBI]
GO:0044829        [VIEW IN EMBL-EBI]
GO:0045069        [VIEW IN EMBL-EBI]
GO:0045070        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048232        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048477        [VIEW IN EMBL-EBI]
GO:0048515        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048524        [VIEW IN EMBL-EBI]
GO:0048599        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050792        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051445        [VIEW IN EMBL-EBI]
GO:0051446        [VIEW IN EMBL-EBI]
GO:0051702        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0051728        [VIEW IN EMBL-EBI]
GO:0051729        [VIEW IN EMBL-EBI]
GO:0051817        [VIEW IN EMBL-EBI]
GO:0051851        [VIEW IN EMBL-EBI]
GO:0060184        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0070555        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903900        [VIEW IN EMBL-EBI]
GO:1903902        [VIEW IN EMBL-EBI]
GO:1990247        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAAGAAGAGGTTCAGGTCTGAAAATGCAGCTGGTGACAAGAAGCCACCTTCCGTCGAAGCCACTAGGATTTGGGCTGCTAAGGTCATCGATGACTTTCGAGCCTCCGTTAACCAAGTTTACACGTTTGAGCATAACCTATCAAACAGCGAACGTAAAGTCATTCATCAGATGTGTCGGAAAATGGGTATTCAATCCAAAAGTTCTGGGCGTGGGGATCAAAGGCGTCTTTCCATATACAAAGGGAGTCACAAAAATGGATGGAACAAAGAAGCTAAGTGGAGATCATCAAACAGAGAGAAGCTCAGATGTGTCTCTTTTCCCCCAGGAGCTCATGCTATTCTTCAGGATTTGTTTACTCACTATCCACCTTGTGACGGAGACACTGCTGCTGCAACCTCGTTTAACAAGTATGTAGGCCGCTCTGGTAAGCAATGGAGAGATGACTTTTTCAGGAAACCACTGTTCAGCCGTGACGAGATCGTTGCAAAGGTGGCGTCTTTGAGTTCTAGGCTGAGGAAAGATAAAGCTCTTCAGGAGATCTCTAAGCTGCGGTCAAAGCTTCCCATTACATCTTTTAGAGACGCAATTACATCTGCTGTTGAATCCAACCAGGTTATTCTCATTTCTGGTGAAACTGGTTGCGGGAAAACTACTCAGGTGCCTCAATATCTTTTAGACCATATGTGGTCAACCAAAAGAGAAAGTTGTAAAATTGTTTGCACTCAACCTCGTCGTATCTCCGCCATGTCAGTTTCTGAAAGAATATCCTGTGAAAGAGGTGAAAGCATTGGAGACAACATTGGTTACAAGGTGCGACTGCAGAGCAAAGGTGGAAGGCACTCATCAGTTGTTTTCTGCACCAATGGCATTCTCCTGAGGGTGCTTGTAGGCAAAGGATCTGTTAGCTATGTTTCCGACATAACTCACATCATTGTGGATGAAATCCATGAAAGGGATTGCTACTCCGATTTCATGTTGGCAATTATAAGGGACTTGCTTCCATCAAATCCTCATCTCCGTCTGATTCTAATGAGTGCTACGCTTGATGCTGAGAGATTTTCTGGATATTTTGGAGGTTGCCATGTTGTCCGTGTCCCTGGATTCACTCATCCAGTGAGAACCTTATATCTGGAGGATGTCCTCTCTATTCTTAAATCAGGTGGAGATAATCATCTAAGCTCTTCCAACTTGAATATACCCGACCAGAAGCTTGATTTGATCGATGAAGATAAACTTGCTTTAGATGAAGCAATCACCTTGGCTTGGACAAATGATGAGTTCGATACCCTCTTAGATCTAGTTTCTTCTCAGGGAAGTCCCCAGATCTACAACTATCAGCACCAATCAACTTGGCTAACACCACTTATGGTCTTTGCTGGAAAGGGAAGGATCAGCGATGTCTGCATGCTCCTCTCACTTGGCGCAGACTGGAAATTAAAGTCTAAAGATGGTATGACAGCTTCAGAATTGGCCGAAGCAGAGAATCACCTAGAAGCTGCTCAAATCATCAGGGAGCATTCTGAAAATTCTCAGTCTAATTCTCAGCAAGCACAACAGTTACTTGACAAGTACATGGCGACAATCAATCCGGAGCAGGTAGATGTGAGTCTTATACTCCAGCTAGTAAGGAAAATATGTGGTGATTCGGAGGATGGTGGTGCCATTCTTGTTTTTCTACCTGGATGGGATGATATAAACAAAACAAGACAGAGATTACTTGACAGCCCTTTTTTCGCAGACAGTAGCAAATTCGACATCATATGTCTGCACTCAATGGTTCCAGCAGGGGAACAGAAGAAAGTTTTTAGTCGCCCTCCTCGAGGTTGCCGCAAGATTGTGCTTGCGACGAATATTGCTGAATCAGCAGTTACCATCGATGATGTGGTTTATGTGATAGATAGTGGCCGGATGAAGGAAAAGAGCTATGATCCTTACAGTAATGTTTCAACTCTTCAATCTTCTTGGGTCTCGAAAGCAAATGCTAAACAGCGTGAGGGTCGAGCAGGACGTTGCCAACCTGGCATTTGTTATCACCTCTATTCTAGACTTCGTGCAGCCTCTATGCCGGAGTTTAAAGTTCCTGAGATTAAGAGGATGCCTGTAGAAGAACTCTGCTTACAGGTTAAGATACTTGATCCAAATTGTAAAACAAACGATTTCCTTCAGAAGTTGTTGGACCCGCCTGTTGATCAAAGTATTGCAAACGCCTTGAGCATCCTACAGGACATTGGGGCCCTGACACCTGAGGAAGAGCTGACAGAACTTGGAGAGAAGTTTGGTCATCTCCCAGTTCATCCTCTTATAAGCAAAATGCTTTTCTTCGCTGTTTTAGTAAACTGTCTGGATCCAGCACTTACTCTGGCATGTGCAGCCGACTACAAGGAACCTTTTACCATGCCTATGTCGCCAGTTGAAAGACAGAAAGCTGCTGCTGCAAAACTTGAACTTGCGTCACTCTGTGGCGGTGACAGTGATCACCTAGCGGTTGTTGCCGCCTTTGAGTGCTGGAAAAACGCTAAAGAAAAGGGTCTTTCCGCTGAGTTTTGCTCTCAGTACTTTGTCTCTCCAAGTGCTATGAAAATGCTGGATCAAATGCGTAGCCAACTCGAGTCTGAACTTAAAAGACACGGGGTTATTCCAAGTGACATCTCAAGTTGTAGCCAGAACTCGCGTGATCCTGGTATACTCCGTGCTGTCCTAGCAGTAGGATTGTATCCAATGGTCGGAAGATTGTGCCCATCTTTTGGTAATAATAGGAGATCTTTAGTGGAGACTGCTAGTGGTGCCAAAGTCCGTGTGCATTCGCTTTCAAACAACTTCAACTTGTCGTCGAGGAAGTATGATGAATCTTTAGTTGTTTTCGATGAGATCACTCGTGGAGATGGAGGCATGCACATAAGAAACTGCACTGTTGCTCGGGATCTTCCTTTGTTACTGATCTCAACAGAGATAGCCGTAGCTCCTACAGAGAGCGGTGATGCTGATGACAGTGAGGAAGATGAAGATGAAGATGAAGATGAAGAAACAGGAGGAGTAGAAGGAGATTCTAGTAATGAAGAGAGTAGGCGTGGAGAGAAGATGATGTCTTCACCTGAAAATTCAGTCAAGTTAGTAGTAGATCGGTGGCTGCCTTTCAAAACCACAGCCCTTGAAGTTGCTCAAATGTACATTTTGCGTGAGCGACTAACTGCATCCATCTTGTTCAAGGTAAGACATCCACGGGAAAATTTGCCGCCTCATCTTGGAGCTTCTATGCATGCAATAGTTTGTCTTCTCTCATATGATGGTCATGCTGGACTTTCATCTCCACCGGAGTCTTTGAGGTCAAAACATTCGAGGACTGAGATGTATGAAACCGGAGGATGTGAAGAGAAACCAAACTCTTTCCTTAACTCCCTCTTTTGGTCTCTGAGCCTGAAAGAAAACAAGCCTTCTTCTAAACAGAGGAATAGGATTCGACAGGATGGCTTCAACACGGCTCCAACAGAAGCTGCATCGATGCATAGGCAGCAAAACAACAGTCAAAGAAAGCCCAAATCAGCCAACAATGTTGATTCGGGTAAGCAAAAGGAGAAAGTGTTTGTTAGGCAGACCAATGTGGTTCACCAACCTGAAGCTGCATCTACCACTAAGCAATTAAAGCATAAATCAGCCAACAGTTTGGTTTCGGGTAACAAGAAAGAGAACGAGTCTTCTGATCAGGTCTATGGGAATCAACAACCGAACACAGCACCAAGAGAAGCTGCTGTATCGATGGCTAAGAATCAAAGCAGCAAGAAAACCAAATCAGCCAACAATACTGATCCGGGTAAGAAGGAAGAGAAAGTGTTTGTTAGTCACACCAATGGGATTCACCAACCTGAAACTGCATATACCGCTAAGCAATCAAAGCATAAATCATCAGCCAACAGTTTGGTTTTGGGTAACAAGAAAGAGAACAAGCCTTCTGATCAAGTTTGTGGGGATCAGCAACCAAACACAGCTCCGAGAGTAGCTGCTGTATTGATGGCTAAGCATCAAAGCAGCAAGAAAACCAAGACAAGGTCAGATTTGGGTAAGAAGCAAGGCATTTATGTTCCAAAGATTGATCTCCATAAAAGGCAACGCGAGGACAAAACAGACTTGAAGGGGACTGCATGA
Protein:  
MGKKRFRSENAAGDKKPPSVEATRIWAAKVIDDFRASVNQVYTFEHNLSNSERKVIHQMCRKMGIQSKSSGRGDQRRLSIYKGSHKNGWNKEAKWRSSNREKLRCVSFPPGAHAILQDLFTHYPPCDGDTAAATSFNKYVGRSGKQWRDDFFRKPLFSRDEIVAKVASLSSRLRKDKALQEISKLRSKLPITSFRDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSTKRESCKIVCTQPRRISAMSVSERISCERGESIGDNIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSYVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCHVVRVPGFTHPVRTLYLEDVLSILKSGGDNHLSSSNLNIPDQKLDLIDEDKLALDEAITLAWTNDEFDTLLDLVSSQGSPQIYNYQHQSTWLTPLMVFAGKGRISDVCMLLSLGADWKLKSKDGMTASELAEAENHLEAAQIIREHSENSQSNSQQAQQLLDKYMATINPEQVDVSLILQLVRKICGDSEDGGAILVFLPGWDDINKTRQRLLDSPFFADSSKFDIICLHSMVPAGEQKKVFSRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYSNVSTLQSSWVSKANAKQREGRAGRCQPGICYHLYSRLRAASMPEFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPEEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKEKGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGVIPSDISSCSQNSRDPGILRAVLAVGLYPMVGRLCPSFGNNRRSLVETASGAKVRVHSLSNNFNLSSRKYDESLVVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTESGDADDSEEDEDEDEDEETGGVEGDSSNEESRRGEKMMSSPENSVKLVVDRWLPFKTTALEVAQMYILRERLTASILFKVRHPRENLPPHLGASMHAIVCLLSYDGHAGLSSPPESLRSKHSRTEMYETGGCEEKPNSFLNSLFWSLSLKENKPSSKQRNRIRQDGFNTAPTEAASMHRQQNNSQRKPKSANNVDSGKQKEKVFVRQTNVVHQPEAASTTKQLKHKSANSLVSGNKKENESSDQVYGNQQPNTAPREAAVSMAKNQSSKKTKSANNTDPGKKEEKVFVSHTNGIHQPETAYTAKQSKHKSSANSLVLGNKKENKPSDQVCGDQQPNTAPRVAAVLMAKHQSSKKTKTRSDLGKKQGIYVPKIDLHKRQREDKTDLKGTA